Rajib Saha
Sessions chaired or co-chaired:
Advances in Computational Methods and Numerical Analysis II
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
Applied Math for Biological and Biomedical Systems II
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
In silico Systems Biology I: Biotechnology Applications
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
In silico Systems Biology II: Health Applications
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
Modeling and Engineering Cellular Communities
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
Modeling and Engineering Cellular Communities
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
Poster Session: Bioengineering
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
Poster Session: Bioengineering
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
Systems and Quantitative Biology of Microbes
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
Systems and Quantitative Biology: Modeling Biological Processes
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
Systems and Quantitative Biology: Modeling Biological Processes
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
Authored:
(674f) Microbiome-Virome Interactions in Bovine Rumen: The Role of Auxiliary Metabolic Genes in Relaxing Metabolic Bottlenecks
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
(362e) Computation-Driven Mechanistic Understanding of the Cellular Cost and Regulation of Melanin Production
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
(343h) K-Ath - Towards a Multi-Tissue Kinetic Model of Arabidopsis thaliana
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
(194u) Effect of Heat Stress on Rice Seed Development: Discovering Global Regulatory Players and Modeling of Rice Metabolism
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
(134b) Elucidating the Physiological Significance of Nitric Oxide Synthase (NOS) in Staphylococcus aureus through Metabolic Modeling
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
Computation-Driven Mechanistic Understanding of the Cellular Cost and Regulation of Defensive Pigment Production5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
Optfill: A Novel Optimization-Based Tool to Automate the Gapfilling of Genome-Scale Metabolic Models5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
Koptic: A Novel Approach for in silico Prediction of Enzyme Kinetics and Regulation5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
Data-Driven Discovery of Novel Therapeutic Targets Against Community-Associated Methicillin-Resistant Staphylococcus Aureus5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
Miren: An Optimization Tool for Data-Driven Discovery of Global Regulatory Phenomena Used to Elucidate the Heat Stress Response Mechanism in Rice Seed5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
Towards a Metabolic and Expression Model of the Metabolically Versatile Bacterium Rhodopseudomonas Palustris5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
Improving Succinic Acid Production in Actinobacillus Succinogenes through Genome-Scale Metabolic Models5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
(643a) Transcriptional Regulators for Predictable and Precise Gene Expression in the Metabolically Versatile Rhodopseudomonas Palustris CGA009
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(188bg) Development of Actinobacillus succinogenes 130Z As a Biotechnology Host for Succinic Acid Production
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(568f) Towards a Metabolic and Expression Model of the Metabolically Versatile Bacterium Rhodopseudomonas Palustris
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(711b) Elucidating Microbiome-Virome Interactions and Metabolic Transactions in Bovine Rumen through in silico genome-Scale Modeling
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(696e) Data-Driven Discovery of Novel Therapeutic Targets through Metabolic Modeling of Staphylococcus Aureus
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(658e) Koptic: A Novel Approach for in silico Prediction of Enzyme Kinetics and Regulation
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(601e) Computation-Driven Mechanistic Understanding of the Cellular Cost and Regulation of Melanin Production
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(315g) Optfill: A Novel Optimization-Based Tool to Automate the Gapfilling of Genome-Scale Metabolic Models
2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)
(549d) Metabolic Modeling and Pulse Amplitude Modulation Fluorometry Elucidate the Interplay between Photosynthesis and Carbon Fixation in a Purple Non-Sulfur Bacterium
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(176v) Miren: An Optimization Tool for Transcriptomic Data-Driven Discovery of Global Regulatory Phenomena during Heat Stress in Rice Seed
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(70g) Conversion of Lignin into Biodegradable Plastic By Rhodopseudomonas Palustris
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(70c) Unlocking the Genetic Potential of Rhodopseudomonas Palustris CGA009 for Lignin Valorization
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(347f) An in silico study of the Metabolic Transactions in the Rumen Microbiome and the Metabolic Shifts Inflicted By Virome Interactions
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(86d) Development of a Non-Leaky Inducible System for Tunable Gene Expression in Actinobacillus Succinogenes 130 Z and Application for Increased Succinic Acid Production
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(466f) EuGeneCD: A Computational Tool for Qualitative Genetic Circuit Design for Eukaryotic Organisms
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(444a) Optfill: A Novel Optimization-Based Tool to Automate the Gapfilling of Genome-Scale Metabolic Models
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(285f) Metabolic Modeling of Sphingolipid Metabolism to Elucidate the Flux Changes and Regulatory Events Induced By Biologically-Significant Perturbations
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(728d) Engineering a Purple Non-Sulfur Bacterium to Expand Symbiotic Nitrogen Fixation
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(736f) Rhodopseudomonas Palustris Polyhydroxybutyrate Production from a Lignin Aromatic and Quantification Via Flow Cytometry
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(748c) Conversion of Lignin into Bioplastic By Rhodopseudomonas Palustris CGA009
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(157ay) Modifying the Operator for More Dynamic Tunable Gene Expression in Paraburkholderia Sacchari.
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(35c) Optimization-Based Analysis of Comparative Metabolomic Data Identifies Regulatory Mechanisms in Staphylococcus Aureus mutants (Faculty Candidate)
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(338e) Data-Driven Identification of Global Regulatory Relationship in Rice Seed Under Heat Stress
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(311b) Metabolic Modeling and Pulse Amplitude Modulation Fluorometry Elucidate the Interplay between Photosynthesis and Carbon Fixation in a Purple Non-Sulfur Bacterium
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(158ab) Predicting the Regulatory Role of ORM Proteins in the Sphingolipid Biosynthesis Pathway Using Ensemble Kinetic Modeling
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(118e) Computation-Driven Analysis of Model Polyextremotolerant Fungus Exophiala Dermatitidis: Defensive Pigment Metabolic Costs and Human Applications
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(613c) Predicting Enzyme Kinetics and Regulations from Dynamic Flux Balance Analysis through Kinetic Optimization Using Integer Conditions
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(620h) Introducing an Optimization- and Explicit Runge-Kutta- Based Approach to Perform Dynamic Flux Balance Analysis
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(338a) Optfill: A Tool for Infeasible Cycle-Free Gapfilling of Stoichiometric Metabolic Models
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(465b) Phasins Employed By Rhodopseudomonas Palustris CGA009 for Bioplastic Production from Lignocellulosic Biomass
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(591b) Omics-Informed Metabolic Modeling Identifies Regulatory Mechanisms in Staphylococcus Aureus mutants
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(41b) Metabolic Modeling to Explore the Landscape of Pancreatic Ductal Adenocarcinoma Cells in Diverse Physiological Conditions
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(226h) Integrated Computational and Experimental Study to Dissect the Stress Response of Maize Root
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(489a) Creating Stable Mutants in the Plant Growth-Promoting Polyploid Rhodopseudomonas Palustris CGA009
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(284a) Introducing a Pair of Tools for the in silico Design and Dynamic Simulation of Eukaryotic Genetic Circuits
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(160ax) Investigating the Role of pBBR1’s Mobilization Protein in Plasmid Maintenance in Nonmodel Bacteria
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(278b) Heterologous Gene Expression Yields Higher Polyhydroxybutyrate Production in Paraburkholderia Sacchari
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(139e) Model-Guided Design Strategies for Bioplastic Overproduction in Rhodopseudomonas Palustris
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(344h) A Kinetic Model of Plant Sphingolipid Metabolism Identifies Key Enzymes and Regulatory Interactions in the Pathway
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
(591g) Introducing New Approaches to Gapfilling and Dynamic Flux Balances Analysis for Genome-Scale Models
2021 Annual Meeting (ISBN: 978-0-8169-1116-5)
Associated proceedings:
2017 Annual Meeting
5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)
2018 AIChE Annual Meeting
2019 AIChE Annual Meeting
2020 Virtual AIChE Annual Meeting
2021 Annual Meeting